BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E02SP1|AL426218
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1559 0.0
>3x_Contig1668
Length = 13429
Score = 1559 bits (785), Expect = 0.0
Identities = 787/789 (99%)
Strand = Plus / Minus
Query: 1 gatcaaagaagacacagtggacttacgagagaagcatttgagaaacttgaagtacagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6497 gatcaaagaagacacagtggacttacgagagaagcatttgagaaacttgaagtacagaaa 6438
Query: 61 gttgatacgctggacgaaaaaacctgtgctatttgttacgatgatttaattaatgacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6437 gttgatacgctggacgaaaaaacctgtgctatttgttacgatgatttaattaatgacccc 6378
Query: 121 aaggattttgccagtwcttcatcgaagagaggtcgggaggaaattggtagtgccgagtca 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6377 aaggattttgccagtacttcatcgaagagaggtcgggaggaaattggtagtgccgagtca 6318
Query: 181 ccgaattctaaaagacagcgtaatgaagaagcagcaccgctaccacatcaagaaggccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317 ccgaattctaaaagacagcgtaatgaagaagcagcaccgctaccacatcaagaaggccta 6258
Query: 241 ccagagaacgaatcagatcaacgtgtagataatgaactgcctgatcctgaatcaagtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6257 ccagagaacgaatcagatcaacgtgtagataatgaactgcctgatcctgaatcaagtgca 6198
Query: 301 caccacacaggagaacaggaaggaggtcaagaagacactcctacttatggacattcagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6197 caccacacaggagaacaggaaggaggtcaagaagacactcctacttatggacattcagcc 6138
Query: 361 acggtacttccttgtggtcatgtatttggaagagagtgtctttacaaatggacaacagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6137 acggtacttccttgtggtcatgtatttggaagagagtgtctttacaaatggacaacagaa 6078
Query: 421 cataacagctgtccgatctgcagggcacctatcttaagcgaagaggaattacaggctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6077 cataacagctgtccgatctgcagggcacctatcttaagcgaagaggaattacaggctctt 6018
Query: 481 cacagcagcgatgatacgtcctcaagaggaaacaatggaccagacgctactcaacaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6017 cacagcagcgatgatacgtcctcaagaggaaacaatggaccagacgctactcaacaatct 5958
Query: 541 acttttgaatccatcagaagactgctttatgaacgttctcctgaaccagctgtagtgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5957 acttttgaatccatcagaagactgctttatgaacgttctcctgaaccagctgtagtgaac 5898
Query: 601 acaattagagaaaatcaattgaatactagttcagcagaaagcatgacaactggcacaaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5897 acaattagagaaaatcaattgaatactagttcagcagaaagcatgacaactggcacaaca 5838
Query: 661 gcctccaatcaaacggatggttctcgtgttacggaaaattcaaatactaatgaaaataga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5837 gcctccaatcaaacggatggttctcgtgttacggaaaattcaaatactaatgaaaataga 5778
Query: 721 cagcaaccagaatctgcgcragatattactaatgatactaataatcagtcaagaactttt 780
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5777 cagcaaccagaatctgcgcaagatattactaatgatactaataatcagtcaagaactttt 5718
Query: 781 tcaaccagt 789
|||||||||
Sbjct: 5717 tcaaccagt 5709
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5229
Number of Sequences: 1807
Number of extensions: 5229
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)